Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. VT-16-41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1102541 bp
Thymine Count
1109492 bp
Guanine Count
1815453 bp
Cytosine Count
1810127 bp
Genome Length
5837613 bp
Protein-coding Genes
5186 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase subunit paai | BTM36_09555 | Not Available | Positive | 1995258 - 1996010 | 28505.0 |
| phenylacetate-coa oxygenase subunit paaj | BTM36_09560 | Not Available | Positive | 1996064 - 1996576 | 18599.3 |
| phenylacetic acid degradation protein | BTM36_09565 | Not Available | Positive | 1996634 - 1997704 | 39486.1 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | BTM36_09570 | Not Available | Positive | 1997738 - 1998538 | 28817.8 |
| 3-hydroxyacyl-coa dehydrogenase | BTM36_09575 | Not Available | Positive | 1998591 - 2000144 | 55773.2 |
| phenylacetic acid degradation protein paad | BTM36_09580 | Not Available | Positive | 2000137 - 2000619 | 16965.3 |
| phenylacetate--coa ligase | BTM36_09585 | Not Available | Positive | 2000704 - 2002065 | 50174.0 |
| 3-oxoadipyl-coa thiolase | BTM36_09590 | Not Available | Positive | 2002103 - 2003308 | 41626.4 |
| 2,3-dehydroadipyl-coa hydratase | BTM36_09595 | Not Available | Positive | 2003308 - 2004096 | 27819.8 |
| sam-dependent methyltransferase | BTM36_09600 | Not Available | Positive | 2004328 - 2005260 | 34356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



