Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. VT-16-41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1102541 bp
Thymine Count
1109492 bp
Guanine Count
1815453 bp
Cytosine Count
1810127 bp
Genome Length
5837613 bp
Protein-coding Genes
5186 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BTM36_09495 | Not Available | Negative | 1979947 - 1980678 | 26012.5 |
| gtp-binding protein ychf | BTM36_09500 | Not Available | Positive | 1981176 - 1982267 | 38920.2 |
| cell filamentation protein fic | BTM36_09505 | Not Available | Positive | 1982510 - 1983571 | 39642.7 |
| branched-chain amino acid abc transporter permease | BTM36_09520 | Not Available | Negative | 1987537 - 1988589 | 36987.6 |
| phenylacetic acid degradation bifunctional protein paaz | BTM36_09525 | Not Available | Negative | 1988731 - 1990794 | 73107.2 |
| branched-chain amino acid abc transporter substrate-binding protein | BTM36_09530 | Not Available | Negative | 1990904 - 1992085 | 41969.9 |
| tetr family transcriptional regulator | BTM36_09535 | Not Available | Negative | 1992157 - 1992777 | 23244.3 |
| phenylacetic acid degradation protein paay | BTM36_09540 | Not Available | Positive | 1993120 - 1993722 | 21254.7 |
| 1,2-phenylacetyl-coa epoxidase subunit a | BTM36_09545 | Not Available | Positive | 1993879 - 1994865 | 37393.5 |
| phenylacetate-coa oxygenase subunit paab | BTM36_09550 | Not Available | Positive | 1994960 - 1995244 | 10594.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



