Herbaspirillum sp. VT-16-41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. VT-16-41 is a Gram-negative bacterium notable for its possession of flagella, which suggests a degree of motility. This trait can enhance its ability to navigate through various environments, possibly contributing to its ecological adaptability. The organism contains a single replicon, which is characteristic of many bacteria and indicates a simpler genomic structure compared to those with multiple replicons. The accession number for Herbaspirillum sp. VT-16-41 is MUXB00000000.1, which provides a reference point for researchers interested in genomic data related to this strain. The availability of such genetic information can facilitate further studies into its metabolic pathways, environmental interactions, and potential applications in biotechnology. In terms of broader biological or ecological significance, the presence of flagella in Herbaspirillum sp. VT-16-41 may play a crucial role in its survival and competitiveness within its ecological niche. The ability to move toward more favorable conditions or away from harmful substances can enhance its success in diverse habitats. This motility, combined with its Gram-negative status, positions it among the myriad of microbial life forms that contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp. VT-16-41
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum sp. VT-16-41

Gene Summary

Adenine Count

1102541 bp

Thymine Count

1109492 bp

Guanine Count

1815453 bp

Cytosine Count

1810127 bp

Genome Length

5837613 bp

Protein-coding Genes

5186 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinBTM36_09495Not AvailableNegative1979947 - 198067826012.5
gtp-binding protein ychfBTM36_09500Not AvailablePositive1981176 - 198226738920.2
cell filamentation protein ficBTM36_09505Not AvailablePositive1982510 - 198357139642.7
branched-chain amino acid abc transporter permeaseBTM36_09520Not AvailableNegative1987537 - 198858936987.6
phenylacetic acid degradation bifunctional protein paazBTM36_09525Not AvailableNegative1988731 - 199079473107.2
branched-chain amino acid abc transporter substrate-binding proteinBTM36_09530Not AvailableNegative1990904 - 199208541969.9
tetr family transcriptional regulatorBTM36_09535Not AvailableNegative1992157 - 199277723244.3
phenylacetic acid degradation protein paayBTM36_09540Not AvailablePositive1993120 - 199372221254.7
1,2-phenylacetyl-coa epoxidase subunit aBTM36_09545Not AvailablePositive1993879 - 199486537393.5
phenylacetate-coa oxygenase subunit paabBTM36_09550Not AvailablePositive1994960 - 199524410594.6

Displaying genes 1801 – 1810 of 5268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.