Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. VT-16-41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1102541 bp
Thymine Count
1109492 bp
Guanine Count
1815453 bp
Cytosine Count
1810127 bp
Genome Length
5837613 bp
Protein-coding Genes
5186 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | BTM36_08885 | Not Available | Negative | 1853926 - 1854492 | 21087.0 |
| hypothetical protein | BTM36_08890 | Not Available | Positive | 1854707 - 1855030 | 12181.8 |
| 4-hydroxybenzoate 3-monooxygenase | BTM36_08895 | Not Available | Negative | 1855080 - 1856246 | 43328.5 |
| arac family transcriptional regulator | BTM36_08900 | Not Available | Positive | 1856404 - 1857315 | 34450.6 |
| iclr family transcriptional regulator | BTM36_08905 | Not Available | Negative | 1857343 - 1858143 | 29233.8 |
| protocatechuate 3,4-dioxygenase subunit beta | BTM36_08910 | Not Available | Positive | 1858393 - 1859085 | 26254.3 |
| protocatechuate 3,4-dioxygenase | BTM36_08915 | Not Available | Positive | 1859110 - 1859622 | 18478.6 |
| 3-carboxy-cis,cis-muconate cycloisomerase | BTM36_08920 | Not Available | Positive | 1859733 - 1861109 | 48621.8 |
| hydrolase | BTM36_08925 | Not Available | Positive | 1861156 - 1862418 | 45286.2 |
| abc transporter substrate-binding protein | BTM36_08930 | Not Available | Negative | 1863208 - 1864392 | 41738.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



