Rhodanobacter sp. B04

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. B04 is a Gram-negative, rod-shaped bacterium characterized by its singular replicon. This taxon is cataloged under the accession number MUNV00000000.1, which serves as a reference for its genomic data. The Gram-negative classification of Rhodanobacter sp. B04 indicates that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, a feature that can influence its interactions with the environment and other organisms. The rod shape suggests a potential for motility and adaptability, traits often associated with the ecological versatility of bacteria in various environments. The presence of a single replicon is significant for understanding the genomic organization and replication mechanisms of Rhodanobacter sp. B04. This simplicity may confer certain advantages in terms of genetic stability and adaptability in fluctuating environments. In summary, the unique traits of Rhodanobacter sp. B04, particularly its Gram-negative nature and rod shape, suggest that it could play a role in ecological processes such as nutrient cycling or bioremediation. Its genomic organization, reflected in the single replicon, may further facilitate its adaptability to diverse ecological niches. Understanding these characteristics can provide insights into the potential applications of Rhodanobacter sp. B04 in environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. B04
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter sp. B04 NODE_22_length_1848_cov_22.097_ID_43, whole

Gene Summary

Adenine Count

681589 bp

Thymine Count

675414 bp

Guanine Count

1224200 bp

Cytosine Count

1224287 bp

Genome Length

3805490 bp

Protein-coding Genes

3306 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine protein kinaseB0E46_10580Not AvailablePositive2411465 - 241316862142.9
peptidoglycan-binding proteinB0E46_10585Not AvailableNegative2413230 - 241414732642.8
phosphoserine transaminaseB0E46_10590Not AvailablePositive2414332 - 241541739382.9
chorismate mutaseB0E46_10595Not AvailablePositive2415493 - 241658139404.9
3-phosphoshikimate 1-carboxyvinyltransferaseB0E46_10600Not AvailablePositive2416684 - 241795244007.2
3-deoxy-manno-octulosonate cytidylyltransferaseB0E46_10605Not AvailablePositive2418013 - 241878928001.6
excinuclease abc subunit cB0E46_10610Not AvailablePositive2418834 - 242066067152.6
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseB0E46_10615Not AvailablePositive2420733 - 242132621486.1
Trna-glyNot AvailableNot AvailablePositive2421382 - 2421457Not Available
Trna-glyNot AvailableNot AvailablePositive2421606 - 2421681Not Available

Displaying genes 2111 – 2120 of 3378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.