Pyramidobacter sp. C12-8

rod

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Dethiosulfovibrionaceae

Genus

Pyramidobacter

Description

Pyramidobacter sp. C12-8 is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, indicating a simpler genomic structure compared to bacteria with multiple replicons. The genomic information for Pyramidobacter sp. C12-8 is available through the accession MUHX00000000.1, which provides a foundational reference for further studies on its genetic and functional characteristics. In terms of ecological and biological significance, Pyramidobacter sp. C12-8 may play a role in specific environmental niches or microbial communities, although detailed ecological interactions are not specified in the provided data. The Gram-negative classification suggests that it may have particular cell wall properties, such as the presence of an outer membrane, which can influence its interactions with other microorganisms and its environment. Understanding the traits of Pyramidobacter sp. C12-8 further enriches our knowledge of microbial diversity and the potential functions of bacteria within their ecosystems. The single replicon may also suggest streamlined metabolic capabilities, which could be advantageous in various habitats where resource availability fluctuates. Overall, Pyramidobacter sp. C12-8 presents an intriguing subject for microbiological research, particularly in the context of its ecological roles and contributions to microbial community dynamics.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyDethiosulfovibrionaceae
GenusPyramidobacter
SpeciesPyramidobacter sp. C12-8
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyramidobacter sp. C12-8 NODE_194_length_204_cov_1351.56_ID_10457,

Gene Summary

Adenine Count

529066 bp

Thymine Count

530833 bp

Guanine Count

802723 bp

Cytosine Count

805722 bp

Genome Length

2668344 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome biogenesis gtp-binding protein ysxcB0D78_10800Not AvailableNegative2320509 - 232110222104.9
atp-dependent clp endopeptidase, proteolytic subunit clppB0D78_10810Not AvailableNegative2324810 - 232538820973.3
trigger factorB0D78_10815Not AvailableNegative2325473 - 232682550701.1
tetr family transcriptional regulatorB0D78_10820Not AvailablePositive2327069 - 232766222560.2
abc transporter atp-binding proteinB0D78_10825Not AvailablePositive2327765 - 232949563471.9
abc transporterB0D78_10830Not AvailablePositive2329498 - 233123464381.9
rna polymerase sigma factor rpodB0D78_10835Not AvailableNegative2331375 - 233264647819.5
hypothetical proteinB0D78_10840Not AvailableNegative2333400 - 233408025608.8
deda family proteinB0D78_10845Not AvailablePositive2334406 - 233503523178.7
cold-shock proteinB0D78_10850Not AvailableNegative2335168 - 23353657315.63

Displaying genes 2111 – 2120 of 2441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.