Pyramidobacter sp. C12-8

rod

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Dethiosulfovibrionaceae

Genus

Pyramidobacter

Description

Pyramidobacter sp. C12-8 is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, indicating a simpler genomic structure compared to bacteria with multiple replicons. The genomic information for Pyramidobacter sp. C12-8 is available through the accession MUHX00000000.1, which provides a foundational reference for further studies on its genetic and functional characteristics. In terms of ecological and biological significance, Pyramidobacter sp. C12-8 may play a role in specific environmental niches or microbial communities, although detailed ecological interactions are not specified in the provided data. The Gram-negative classification suggests that it may have particular cell wall properties, such as the presence of an outer membrane, which can influence its interactions with other microorganisms and its environment. Understanding the traits of Pyramidobacter sp. C12-8 further enriches our knowledge of microbial diversity and the potential functions of bacteria within their ecosystems. The single replicon may also suggest streamlined metabolic capabilities, which could be advantageous in various habitats where resource availability fluctuates. Overall, Pyramidobacter sp. C12-8 presents an intriguing subject for microbiological research, particularly in the context of its ecological roles and contributions to microbial community dynamics.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyDethiosulfovibrionaceae
GenusPyramidobacter
SpeciesPyramidobacter sp. C12-8
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyramidobacter sp. C12-8 NODE_194_length_204_cov_1351.56_ID_10457,

Gene Summary

Adenine Count

529066 bp

Thymine Count

530833 bp

Guanine Count

802723 bp

Cytosine Count

805722 bp

Genome Length

2668344 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
geranyl transferaseB0D78_09960Not AvailableNegative2148190 - 214908332212.8
exodeoxyribonuclease vii small subunitB0D78_09965Not AvailableNegative2149073 - 21492978510.03
50s ribosomal protein l28B0D78_09970Not AvailablePositive2149451 - 21496457242.96
hypothetical proteinB0D78_09975Not AvailableNegative2149820 - 215236991553.0
hypothetical proteinB0D78_09980Not AvailableNegative2152432 - 215378748025.0
hypothetical proteinB0D78_09985Not AvailableNegative2153787 - 215492041829.0
aminodeoxychorismate lyaseB0D78_09990Not AvailableNegative2154953 - 215594536874.1
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaB0D78_09995Not AvailableNegative2155960 - 215700938968.1
hypothetical proteinB0D78_10000Not AvailableNegative2157054 - 215848451846.1
holliday junction branch migration dna helicase ruvbB0D78_10005Not AvailableNegative2158465 - 215949337610.6

Displaying genes 1951 – 1960 of 2441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.