Pyramidobacter sp. C12-8

rod

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Dethiosulfovibrionaceae

Genus

Pyramidobacter

Description

Pyramidobacter sp. C12-8 is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, indicating a simpler genomic structure compared to bacteria with multiple replicons. The genomic information for Pyramidobacter sp. C12-8 is available through the accession MUHX00000000.1, which provides a foundational reference for further studies on its genetic and functional characteristics. In terms of ecological and biological significance, Pyramidobacter sp. C12-8 may play a role in specific environmental niches or microbial communities, although detailed ecological interactions are not specified in the provided data. The Gram-negative classification suggests that it may have particular cell wall properties, such as the presence of an outer membrane, which can influence its interactions with other microorganisms and its environment. Understanding the traits of Pyramidobacter sp. C12-8 further enriches our knowledge of microbial diversity and the potential functions of bacteria within their ecosystems. The single replicon may also suggest streamlined metabolic capabilities, which could be advantageous in various habitats where resource availability fluctuates. Overall, Pyramidobacter sp. C12-8 presents an intriguing subject for microbiological research, particularly in the context of its ecological roles and contributions to microbial community dynamics.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyDethiosulfovibrionaceae
GenusPyramidobacter
SpeciesPyramidobacter sp. C12-8
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyramidobacter sp. C12-8 NODE_194_length_204_cov_1351.56_ID_10457,

Gene Summary

Adenine Count

529066 bp

Thymine Count

530833 bp

Guanine Count

802723 bp

Cytosine Count

805722 bp

Genome Length

2668344 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate abc transporter substrate-binding proteinB0D78_09685Not AvailableNegative2090865 - 209184535136.8
hydroxymethylglutaryl-coa lyaseB0D78_09690Not AvailableNegative2091940 - 209287533368.5
carnitine dehydrataseB0D78_09695Not AvailableNegative2092929 - 209412543318.7
pyruvate:ferredoxin (flavodoxin) oxidoreductaseB0D78_09700Not AvailablePositive2094710 - 2098267130191.0
hypothetical proteinB0D78_09705Not AvailablePositive2098978 - 209981130666.5
tungsten formylmethanofuran dehydrogenaseB0D78_09710Not AvailablePositive2100050 - 21002657799.59
3-methyl-2-oxobutanoate dehydrogenase subunit vorbB0D78_09715Not AvailablePositive2100282 - 210133438389.3
2-oxoglutarate oxidoreductaseB0D78_09720Not AvailablePositive2101347 - 210209027222.1
hypothetical proteinB0D78_09725Not AvailableNegative2102528 - 210305520053.9
ferredoxinB0D78_09730Not AvailableNegative2103305 - 210408127372.2

Displaying genes 1901 – 1910 of 2441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.