Pyramidobacter sp. C12-8

rod

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Dethiosulfovibrionaceae

Genus

Pyramidobacter

Description

Pyramidobacter sp. C12-8 is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, indicating a simpler genomic structure compared to bacteria with multiple replicons. The genomic information for Pyramidobacter sp. C12-8 is available through the accession MUHX00000000.1, which provides a foundational reference for further studies on its genetic and functional characteristics. In terms of ecological and biological significance, Pyramidobacter sp. C12-8 may play a role in specific environmental niches or microbial communities, although detailed ecological interactions are not specified in the provided data. The Gram-negative classification suggests that it may have particular cell wall properties, such as the presence of an outer membrane, which can influence its interactions with other microorganisms and its environment. Understanding the traits of Pyramidobacter sp. C12-8 further enriches our knowledge of microbial diversity and the potential functions of bacteria within their ecosystems. The single replicon may also suggest streamlined metabolic capabilities, which could be advantageous in various habitats where resource availability fluctuates. Overall, Pyramidobacter sp. C12-8 presents an intriguing subject for microbiological research, particularly in the context of its ecological roles and contributions to microbial community dynamics.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyDethiosulfovibrionaceae
GenusPyramidobacter
SpeciesPyramidobacter sp. C12-8
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyramidobacter sp. C12-8 NODE_194_length_204_cov_1351.56_ID_10457,

Gene Summary

Adenine Count

529066 bp

Thymine Count

530833 bp

Guanine Count

802723 bp

Cytosine Count

805722 bp

Genome Length

2668344 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoacid:ferredoxin oxidoreductase subunit betaB0D78_00770Not AvailableNegative174653 - 17547129587.0
2-oxoglutarate synthase subunit alphaB0D78_00775Not AvailableNegative175473 - 17660941615.8
ferredoxinB0D78_00780Not AvailableNegative176609 - 1768157472.14
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabB0D78_00785Not AvailableNegative176874 - 17753023377.4
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeB0D78_00790Not AvailableNegative177527 - 17801518108.7
hypothetical proteinB0D78_00795Not AvailableNegative178009 - 17950252107.0
holo-[acyl-carrier-protein] synthaseB0D78_00800Not AvailableNegative179502 - 17987613354.1
Trna-valNot AvailableNot AvailablePositive180036 - 180110Not Available
peptide methionine sulfoxide reductaseB0D78_00810Not AvailablePositive180289 - 18137740230.0
pyrroline-5-carboxylate reductaseB0D78_00815Not AvailableNegative181459 - 18227427780.7

Displaying genes 181 – 190 of 2441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.