Escherichia coli strain SJRP/Ec42664 Cotig_57

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SJRP/Ec42664 Cotig_57 is a facultative anaerobic, Gram-negative bacterium characterized by its rod shape and the presence of flagella, allowing for mobility. This strain typically exists in pairs or singles and is classified as mesophilic, with an optimal growth temperature of 37°C. It features a biotic relationship that is free-living, and it possesses a single replicon and two membranes. The habitat of this strain is primarily host-associated, with a diverse range of hosts including Homo sapiens, Gallus gallus, Bos taurus, and various other species across multiple taxa such as Metazoa, Mollusca, and Vertebrata. This diversity highlights its ecological adaptability and potential for interaction with various organisms in different environments. E. coli strain SJRP/Ec42664 is known to be pathogenic to humans, associated with a wide array of health effects. These include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and more severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The strain's role in various diseases underscores its significance in public health and its impact on both animal and human health. The presence of this strain in a variety of hosts suggests its ecological versatility, allowing it to thrive in different environments and contribute to both symbiotic and pathogenic relationships. Understanding the interactions of E. coli strain SJRP/Ec42664 within its host organisms can provide insights into its pathogenic mechanisms and inform strategies for managing infections associated with this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain SJRP/Ec42664 Cotig_57

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SJRP/Ec42664 Cotig_57
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain SJRP/Ec42664 Cotig_57


Gene Summary

Adenine Count

1332125 bp

Thymine Count

1338882 bp

Guanine Count

1364194 bp

Cytosine Count

1387816 bp

Genome Length

5423017 bp

Protein-coding Genes

5132 genes

Non-Coding Genes

378 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative transcriptional repressor dicaBZL31_06295Not AvailablePositive1225658 - 122597812262.5
hypothetical proteinBZL31_06300Not AvailablePositive1226064 - 12262225775.69
hypothetical proteinBZL31_06305Not AvailablePositive1226206 - 122650511215.7
hypotheticalBZL31_06310Not AvailableNegative1226559 - 12267326595.1
Regulatory protein rhaBZL31_06315Not AvailablePositive1227223 - 122757912756.5
Regulatory protein rhaBZL31_06320Not AvailablePositive1227639 - 122849031226.7
Host killing proteinBZL31_06325Not AvailablePositive1228536 - 12287578394.12
Exodeoxyribonuclease viiiBZL31_06330Not AvailablePositive1228877 - 123133090453.4
Hypothetical proteinBZL31_06335Not AvailablePositive1231389 - 12315927692.35
Integrase proteinBZL31_06340Not AvailablePositive1231592 - 123261739214.0

Displaying genes 1 – 10 of 5510 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total