Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SJRP/Ec42664 Cotig_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332125 bp
Thymine Count
1338882 bp
Guanine Count
1364194 bp
Cytosine Count
1387816 bp
Genome Length
5423017 bp
Protein-coding Genes
5132 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BZL31_20020 | Not Available | Positive | 3841376 - 3842503 | 42264.2 |
| exoribonuclease 2 | BZL31_20025 | Not Available | Positive | 3842571 - 3844505 | 72512.9 |
| hypothetical protein | BZL31_20030 | Not Available | Negative | 3844582 - 3844686 | 4122.21 |
| cyclic di-gmp phosphodiesterase | BZL31_20035 | Not Available | Positive | 3844740 - 3846725 | 74730.3 |
| hypothetical protein | BZL31_20040 | Not Available | Positive | 3846872 - 3847045 | 6441.71 |
| deor family transcriptional regulator | BZL31_20045 | Not Available | Positive | 3847135 - 3847884 | 27590.2 |
| osmotically-inducible lipoprotein b | BZL31_20050 | Not Available | Positive | 3848153 - 3848371 | 6948.51 |
| translation initiation factor | BZL31_20055 | Not Available | Negative | 3848497 - 3848823 | 11396.9 |
| orotidine 5'-phosphate decarboxylase | BZL31_20060 | Not Available | Negative | 3848823 - 3849560 | 26367.8 |
| lps assembly protein b | BZL31_20065 | Not Available | Negative | 3849753 - 3850922 | 44533.6 |
Pathways
828 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





