Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SJRP/Ec42664 Cotig_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332125 bp
Thymine Count
1338882 bp
Guanine Count
1364194 bp
Cytosine Count
1387816 bp
Genome Length
5423017 bp
Protein-coding Genes
5132 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenoprotein ydfz | BZL31_18815 | Not Available | Positive | 3617290 - 3617493 | 7276.83 |
| d-mannonate oxidoreductase | BZL31_18820 | Not Available | Negative | 3617529 - 3618989 | 53738.3 |
| mfs transporter | BZL31_18825 | Not Available | Negative | 3619078 - 3620361 | 46269.9 |
| hypothetical protein | BZL31_18830 | Not Available | Positive | 3621148 - 3621381 | 8778.78 |
| hypothetical protein | BZL31_18835 | Not Available | Negative | 3621704 - 3621894 | 7208.92 |
| hok/gef family protein | BZL31_18840 | Not Available | Positive | 3622115 - 3622255 | 5208.58 |
| hypothetical protein | BZL31_18845 | Not Available | Negative | 3622802 - 3623074 | 10243.7 |
| hicb family protein | BZL31_18850 | Not Available | Negative | 3623407 - 3623805 | 14384.8 |
| addiction module toxin, hica family | BZL31_18855 | Not Available | Negative | 3623828 - 3623983 | 5786.22 |
| integration host factor subunit alpha | BZL31_18860 | Not Available | Negative | 3624239 - 3624538 | 11354.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





