Helicobacter pylori strain SV397_2

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain SV397_2 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella, which enables motility despite a non-motile classification. This strain is typically found in a host-associated habitat and exhibits a cell arrangement of singles. It thrives optimally at a temperature of 37°C, categorizing it as mesophilic, and possesses a unique structure with two membranes and a single replicon. This strain is associated with a variety of hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), various Aves (birds), primates, mammals, and rodents, as well as amoebas. The pathogenicity of Helicobacter pylori strain SV397_2 is particularly significant in humans, as it is linked to numerous gastrointestinal diseases. Notable health effects include chronic gastric inflammation, gastric ulcers, and various forms of cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. The extensive list of health issues associated with this strain underscores its potential impact on human health, particularly concerning chronic conditions like gastritis and peptic ulcer disease. Given its free-living biotic relationship and the diverse range of hosts it can inhabit, Helicobacter pylori strain SV397_2 serves as a critical example of a pathogen that not only affects its primary host but also has the capacity to influence the health of various species within its ecological niche. This highlights the importance of understanding host-pathogen interactions within microbiology and public health contexts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain SV397_2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain SV397_2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain SV397_2 SV397_contig54, whole genome

Gene Summary

Adenine Count

506150 bp

Thymine Count

506142 bp

Guanine Count

321925 bp

Cytosine Count

326818 bp

Genome Length

1661366 bp

Protein-coding Genes

1496 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBZK22_01240Not AvailablePositive263540 - 26437329734.6
peptide methionine sulfoxide reductaseBZK22_01245Not AvailableNegative264778 - 26585741289.0
dna repair protein radaBZK22_01250Not AvailableNegative265981 - 26732749426.2
iron-sulfur cluster assembly scaffold protein nifuBZK22_01260Not AvailableNegative267832 - 26881236263.8
cysteine desulfurase, nifs familyBZK22_01265Not AvailableNegative268834 - 26998541997.3
cysteine desulfuraseBZK22_01270Not AvailableNegative269976 - 2701225933.35
dna-binding proteinBZK22_01275Not AvailableNegative270172 - 27065118566.8
phospholipid-binding proteinBZK22_01280Not AvailablePositive270778 - 27132920737.9
1-deoxy-d-xylulose-5-phosphate reductoisomeraseBZK22_01290Not AvailableNegative272583 - 27368940239.3
phosphatidate cytidylyltransferaseBZK22_01295Not AvailableNegative273690 - 27449028824.1

Displaying genes 231 – 240 of 1538 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total