Helicobacter pylori strain SV397_2

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain SV397_2 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella, which enables motility despite a non-motile classification. This strain is typically found in a host-associated habitat and exhibits a cell arrangement of singles. It thrives optimally at a temperature of 37°C, categorizing it as mesophilic, and possesses a unique structure with two membranes and a single replicon. This strain is associated with a variety of hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), various Aves (birds), primates, mammals, and rodents, as well as amoebas. The pathogenicity of Helicobacter pylori strain SV397_2 is particularly significant in humans, as it is linked to numerous gastrointestinal diseases. Notable health effects include chronic gastric inflammation, gastric ulcers, and various forms of cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. The extensive list of health issues associated with this strain underscores its potential impact on human health, particularly concerning chronic conditions like gastritis and peptic ulcer disease. Given its free-living biotic relationship and the diverse range of hosts it can inhabit, Helicobacter pylori strain SV397_2 serves as a critical example of a pathogen that not only affects its primary host but also has the capacity to influence the health of various species within its ecological niche. This highlights the importance of understanding host-pathogen interactions within microbiology and public health contexts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain SV397_2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain SV397_2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain SV397_2 SV397_contig54, whole genome

Gene Summary

Adenine Count

506150 bp

Thymine Count

506142 bp

Guanine Count

321925 bp

Cytosine Count

326818 bp

Genome Length

1661366 bp

Protein-coding Genes

1496 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 2-thiocytidine(32) synthetase ttcaBZK22_07690Not AvailableNegative1547948 - 154870928550.4
mfs transporterBZK22_07695Not AvailableNegative1548729 - 155006048817.3
Trna-metNot AvailableNot AvailablePositive1550206 - 1550283Not Available
nucleoside transporter nupcBZK22_07705Not AvailablePositive1550389 - 155164543616.0
phosphopentomutaseBZK22_07710Not AvailablePositive1551657 - 155289846021.0
purine-nucleoside phosphorylaseBZK22_07715Not AvailablePositive1552895 - 155359925889.6
hypothetical proteinBZK22_07720Not AvailableNegative1553747 - 155409413253.2
sam-dependent methyltransferaseBZK22_07725Not AvailableNegative1554219 - 155551750900.4
hypothetical proteinBZK22_07735Not AvailablePositive1556185 - 155799065062.2
transposaseBZK22_07740Not AvailableNegative1557991 - 15581827892.61

Displaying genes 1431 – 1440 of 1538 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total