Helicobacter pylori strain PZ5006_3A3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PZ5006_3A3 is a microaerophilic, gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. It possesses flagella, which contribute to its mobility, although it is noted that it does not exhibit significant movement. This strain thrives optimally at 37°C and falls within the mesophilic temperature range, indicating its adaptation to the warm environment of its hosts. PZ5006_3A3 is associated with various hosts, including Homo sapiens, Gallus gallus, and multiple other species across Aves, Primates, Mammalia, Rodentia, and Cricetinae, as well as Amoeba. The biotic relationship of this strain is classified as free-living, suggesting it can survive independently of a host under specific conditions. This bacterium is notably linked to several significant health issues, primarily chronic gastric inflammation and various types of gastric cancer, including gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. It is also associated with peptic ulcer disease, functional dyspepsia, and several other gastrointestinal conditions. The health effects range from asymptomatic mucosal inflammatory responses to severe complications like acute gastric ulcers and dysplasia. Given the extensive list of health complications associated with Helicobacter pylori strain PZ5006_3A3, its presence in the human gastrointestinal tract is of great concern. This strain highlights the complex interplay between microbial inhabitants and host health, underscoring the need for further research into its pathogenic mechanisms and potential therapeutic interventions.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PZ5006_3A3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PZ5006_3A3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PZ5006_3A3


Gene Summary

Adenine Count

500919 bp

Thymine Count

492785 bp

Guanine Count

321636 bp

Cytosine Count

317637 bp

Genome Length

1633699 bp

Protein-coding Genes

1473 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanine--d-alanine ligase aBZK26_02340Not AvailableNegative468975 - 47001839783.2
hypothetical proteinBZK26_02345Not AvailableNegative470095 - 47057116967.2
aminotransferaseBZK26_02350Not AvailablePositive470718 - 47182741026.8
nicotinate phosphoribosyltransferaseBZK26_02355Not AvailablePositive471836 - 47229717655.3
ribosomal protein s12 methylthiotransferase rimoBZK26_02360Not AvailablePositive472299 - 47361849668.9
labile enterotoxin output aBZK26_02370Not AvailablePositive475599 - 47731466194.7
hypothetical proteinBZK26_02375Not AvailablePositive477424 - 47772911681.2
atp-binding proteinBZK26_02380Not AvailablePositive477738 - 47879941768.3
trna lysidine(34) synthetase tilsBZK26_02385Not AvailablePositive478835 - 47985140090.0
pp_00471BZK26_02390Not AvailablePositive479943 - 480929Not Available

Displaying genes 441 – 450 of 1515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 66 in total