Helicobacter pylori strain PZ5006_3A3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PZ5006_3A3 is a microaerophilic, gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. It possesses flagella, which contribute to its mobility, although it is noted that it does not exhibit significant movement. This strain thrives optimally at 37°C and falls within the mesophilic temperature range, indicating its adaptation to the warm environment of its hosts. PZ5006_3A3 is associated with various hosts, including Homo sapiens, Gallus gallus, and multiple other species across Aves, Primates, Mammalia, Rodentia, and Cricetinae, as well as Amoeba. The biotic relationship of this strain is classified as free-living, suggesting it can survive independently of a host under specific conditions. This bacterium is notably linked to several significant health issues, primarily chronic gastric inflammation and various types of gastric cancer, including gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. It is also associated with peptic ulcer disease, functional dyspepsia, and several other gastrointestinal conditions. The health effects range from asymptomatic mucosal inflammatory responses to severe complications like acute gastric ulcers and dysplasia. Given the extensive list of health complications associated with Helicobacter pylori strain PZ5006_3A3, its presence in the human gastrointestinal tract is of great concern. This strain highlights the complex interplay between microbial inhabitants and host health, underscoring the need for further research into its pathogenic mechanisms and potential therapeutic interventions.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PZ5006_3A3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PZ5006_3A3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PZ5006_3A3


Gene Summary

Adenine Count

500919 bp

Thymine Count

492785 bp

Guanine Count

321636 bp

Cytosine Count

317637 bp

Genome Length

1633699 bp

Protein-coding Genes

1473 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase factor sigma-54BZK26_07930Not AvailablePositive1611550 - 161279448287.2
hypothetical proteinBZK26_07935Not AvailableNegative1612806 - 161310511595.2
competence protein comgfBZK26_07945Not AvailableNegative1613509 - 161472947223.2
gnat family n-acetyltransferaseBZK26_07950Not AvailableNegative1614975 - 161546018404.3
6-pyruvoyl tetrahydropterin synthaseBZK26_07955Not AvailableNegative1615551 - 161630628704.8
6-carboxy-5,6,7,8-tetrahydropterin synthaseBZK26_07960Not AvailableNegative1616303 - 161690523648.1
hypothetical proteinBZK26_07965Not AvailableNegative1616909 - 161756825966.2
5'/3'-nucleotidase sureBZK26_07970Not AvailableNegative1617565 - 161836830058.9
geranyl transferaseBZK26_07975Not AvailableNegative1618365 - 161927634075.2
gtp cyclohydrolase i foleBZK26_07980Not AvailableNegative1619292 - 161983420890.5

Displaying genes 1491 – 1500 of 1515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 66 in total