Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | strain PDD-32b-74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1164895 bp
Thymine Count
1169256 bp
Guanine Count
1687196 bp
Cytosine Count
1682653 bp
Genome Length
5704000 bp
Protein-coding Genes
4847 genes
Non-Coding Genes
156 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BW686_13135 | Not Available | Negative | 3000964 - 3002028 | 38669.1 |
| Trna-leu | Not Available | Not Available | Positive | 3002146 - 3002230 | Not Available |
| hcp1 family type vi secretion system effector | BW686_13145 | Not Available | Positive | 3002537 - 3003031 | 17850.1 |
| hypothetical protein | BW686_13150 | Not Available | Negative | 3003104 - 3003421 | 11870.0 |
| hypothetical protein | BW686_13155 | Not Available | Negative | 3003427 - 3004071 | 24302.1 |
| type iii effector | BW686_13405 | Not Available | Negative | 3046425 - 3047825 | 50555.0 |
| type iii effector hrpk | BW686_13410 | Not Available | Negative | 3047981 - 3050302 | 80200.6 |
| rna polymerase subunit sigma | BW686_13415 | Not Available | Negative | 3050388 - 3050942 | 21048.2 |
| sepl/tyea/hrpj family type iii secretion system gatekeeper | BW686_13420 | Not Available | Positive | 3051186 - 3052292 | 40596.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | BW686_13425 | Not Available | Positive | 3052292 - 3054379 | 76353.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |










