Escherichia coli strain ICBEcBL-II-13

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ICBEcBL-II-13 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, exhibiting mobility due to the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and it typically exists in pairs or singles. It is host-associated and displays a free-living biotic relationship. This strain has a diverse range of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and various other mammals, birds, and even some plants such as Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). Its broad host range suggests that ICBEcBL-II-13 may play a significant ecological role in various environments, potentially influencing microbial communities across different habitats. ICBEcBL-II-13 is associated with numerous health effects in humans, primarily linked to urinary tract infections (UTIs), gastrointestinal infections, and severe outcomes such as hemolytic uremic syndrome (HUS). The strain's pathogenicity is notable, as it can lead to conditions like neonatal meningitis and septicemia, showcasing its impact on human health. The presence of this strain in hosts like mammals and birds indicates its potential for zoonotic transmission and highlights the importance of monitoring its spread in both agricultural and clinical settings. Understanding the pathogenic mechanisms of E. coli strains like ICBEcBL-II-13 is crucial for developing effective interventions against the diseases it may cause.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ICBEcBL-II-13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ICBEcBL-II-13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ICBEcBL-II-13


Gene Summary

Adenine Count

1232445 bp

Thymine Count

1231303 bp

Guanine Count

1255900 bp

Cytosine Count

1252694 bp

Genome Length

4972342 bp

Protein-coding Genes

5228 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail proteinBXT93_03730Not AvailableNegative715798 - 7160278770.79
Hypothetical proteinBXT93_03735Not AvailableNegative716042 - 71848986466.6
Putative phage tail proteinBXT93_03740Not AvailableNegative718482 - 7186014560.46
Tail proteinBXT93_03745Not AvailableNegative718634 - 7189099664.92
Tail tube proteinBXT93_03750Not AvailableNegative718966 - 71948419069.8
Phage tail sheath protein fiBXT93_03755Not AvailableNegative719497 - 72068743107.9
hypothetical proteinBXT93_03760Not AvailableNegative720939 - 72177531932.0
hypothetical proteinBXT93_03765Not AvailableNegative722069 - 72302237759.0
Tail fiber assembly proteinBXT93_03770Not AvailableNegative723191 - 72371820163.8
Dna packaging proteinBXT93_07085Not AvailablePositive1350763 - 135268571856.5

Displaying genes 1 – 10 of 5350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total