Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase subunit c | BXT93_03990 | Not Available | Negative | 763538 - 764401 | 30832.2 |
| dimethyl sulfoxide reductase subunit b | BXT93_03995 | Not Available | Negative | 764403 - 765020 | 22870.1 |
| dimethyl sulfoxide reductase subunit a | BXT93_04000 | Not Available | Negative | 765031 - 766999 | 72635.2 |
| nucleoside-specific channel-forming protein tsx | BXT93_04005 | Not Available | Negative | 767129 - 768013 | 33590.6 |
| hypothetical protein | BXT93_04010 | Not Available | Negative | 768311 - 768850 | 19591.6 |
| nrdr family transcriptional regulator | BXT93_04015 | Not Available | Positive | 769001 - 769450 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | BXT93_04020 | Not Available | Positive | 769454 - 770557 | 40409.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | BXT93_04025 | Not Available | Positive | 770646 - 771116 | 16157.4 |
| n utilization substance protein b | BXT93_04030 | Not Available | Positive | 771136 - 771555 | 15689.9 |
| thiamine-phosphate kinase | BXT93_04035 | Not Available | Positive | 771633 - 772610 | 35076.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





