Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | BXT93_02585 | Not Available | Positive | 492922 - 493488 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | BXT93_02590 | Not Available | Positive | 493485 - 494060 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | BXT93_02595 | Not Available | Positive | 494029 - 494586 | 20128.1 |
| abc transporter atp-binding protein | BXT93_02600 | Not Available | Positive | 494593 - 495318 | 26802.3 |
| rna polymerase sigma-54 factor | BXT93_02605 | Not Available | Positive | 495366 - 496799 | 53996.8 |
| ribosome hibernation promoting factor | BXT93_02610 | Not Available | Positive | 496822 - 497109 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | BXT93_02615 | Not Available | Positive | 497227 - 497718 | 17960.6 |
| rnase adaptor protein rapz | BXT93_02620 | Not Available | Positive | 497764 - 498618 | 32494.2 |
| phosphocarrier protein npr | BXT93_02625 | Not Available | Positive | 498615 - 498887 | 9810.71 |
| hypothetical protein | BXT93_02630 | Not Available | Positive | 499100 - 499732 | 24406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





