Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine(32) synthetase ttca | BXT93_26895 | Not Available | Positive | 4885853 - 4886788 | 35516.9 |
| atp-dependent rna helicase | BXT93_26900 | Not Available | Negative | 4886917 - 4888290 | 49243.8 |
| hypothetical protein | BXT93_26905 | Not Available | Negative | 4888320 - 4888493 | 6427.87 |
| zinc transporter zntb | BXT93_26910 | Not Available | Negative | 4888768 - 4889751 | 36614.3 |
| sensor domain-containing diguanylate cyclase | BXT93_26915 | Not Available | Positive | 4890006 - 4891238 | 46482.9 |
| dna endonuclease smra | BXT93_26920 | Not Available | Negative | 4891259 - 4891822 | 21577.8 |
| hypothetical protein | BXT93_26925 | Not Available | Negative | 4892017 - 4892769 | 27727.2 |
| formate dehydrogenase cytochrome b556 subunit | BXT93_26930 | Not Available | Positive | 4892837 - 4893490 | 25351.9 |
| arginine--trna ligase | BXT93_26935 | Not Available | Positive | 4893591 - 4895027 | 54118.8 |
| flagellar protein flhe | BXT93_26940 | Not Available | Negative | 4895080 - 4895472 | 14082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





