Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate/lactate/ureidoglycolate dehydrogenase | BXT93_25960 | Not Available | Negative | 4742218 - 4743303 | 38889.3 |
| dna-binding protein ybib | BXT93_25965 | Not Available | Negative | 4743444 - 4744406 | 35027.6 |
| atp-dependent dna helicase ding | BXT93_25970 | Not Available | Negative | 4744434 - 4746233 | 68708.1 |
| peptide abc transporter substrate-binding protein | BXT93_25975 | Not Available | Negative | 4746234 - 4746908 | 24535.1 |
| d-alanyl-d-alanine dipeptidase | BXT93_25980 | Not Available | Negative | 4746922 - 4747503 | 21282.3 |
| hypothetical protein | BXT93_25985 | Not Available | Negative | 4747761 - 4747936 | 6488.03 |
| nickel abc transporter permease subunit nikb | BXT93_25990 | Not Available | Positive | 4747937 - 4748162 | 8544.7 |
| phosphoribosylglycinamide formyltransferase | BXT93_25995 | Not Available | Negative | 4748163 - 4748762 | 21927.1 |
| phosphoribosylformylglycinamidine cyclo-ligase | BXT93_26000 | Not Available | Negative | 4748762 - 4748989 | 8444.01 |
| sorbitol-6-phosphate 2-dehydrogenase | BXT93_26005 | Not Available | Positive | 4748990 - 4749557 | 20628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





