Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | BXT93_21870 | Not Available | Negative | 4083348 - 4083686 | 13256.5 |
| phage tail tape measure protein | BXT93_21875 | Not Available | Negative | 4083679 - 4086912 | 117827.0 |
| hypothetical protein | BXT93_21880 | Not Available | Negative | 4087078 - 4087409 | 12582.1 |
| transposase | BXT93_21885 | Not Available | Positive | 4087410 - 4087708 | 11683.0 |
| transposase | BXT93_21890 | Not Available | Positive | 4087709 - 4087964 | 9927.52 |
| type i restriction-modification system subunit m | BXT93_21895 | Not Available | Positive | 4088316 - 4089902 | 59669.5 |
| type i restriction endonuclease subunit s | BXT93_21900 | Not Available | Positive | 4089899 - 4090990 | 40769.0 |
| hypothetical protein | BXT93_21905 | Not Available | Positive | 4090987 - 4091670 | 25665.9 |
| cold-shock protein | BXT93_21910 | Not Available | Positive | 4091693 - 4093477 | 68585.7 |
| dead/deah box helicase | BXT93_21915 | Not Available | Positive | 4093547 - 4096111 | 96639.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





