Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine permease | BXT93_16760 | Not Available | Positive | 3221859 - 3223118 | 43628.2 |
| cytosine deaminase | BXT93_16765 | Not Available | Positive | 3223108 - 3224391 | 47596.9 |
| transcriptional regulator cynr | BXT93_16770 | Not Available | Negative | 3224431 - 3225330 | 32788.4 |
| carbonic anhydrase | BXT93_16775 | Not Available | Positive | 3225440 - 3226099 | 23775.6 |
| cyanase | BXT93_16780 | Not Available | Positive | 3226130 - 3226600 | 17033.8 |
| cyanate transporter | BXT93_16785 | Not Available | Positive | 3226606 - 3227787 | 42443.5 |
| Trna-thr | Not Available | Not Available | Positive | 3227993 - 3228068 | Not Available |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | BXT93_16795 | Not Available | Positive | 3228123 - 3228388 | 9046.93 |
| 4-hydroxyphenylacetate permease | BXT93_16800 | Not Available | Positive | 3228506 - 3229882 | 50613.7 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | BXT93_16805 | Not Available | Positive | 3229892 - 3230782 | 34332.0 |
Pathways
883 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





