Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | BXT93_16545 | Not Available | Positive | 3175249 - 3175839 | 21837.3 |
| aconitate hydratase 1 | BXT93_16550 | Not Available | Negative | 3175903 - 3178578 | 97782.0 |
| hypothetical protein | BXT93_16555 | Not Available | Positive | 3178752 - 3178877 | 4906.91 |
| hypothetical protein | BXT93_16560 | Not Available | Negative | 3178951 - 3179118 | 6369.21 |
| hypothetical protein | BXT93_16565 | Not Available | Negative | 3179121 - 3179249 | 4866.05 |
| lysr family transcriptional regulator cysb | BXT93_16570 | Not Available | Negative | 3179580 - 3180554 | 36152.5 |
| topoisomerase i | BXT93_16580 | Not Available | Negative | 3180765 - 3180893 | 4814.68 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | BXT93_16585 | Not Available | Positive | 3180894 - 3182144 | 43510.8 |
| alpha-mannosidase | BXT93_16590 | Not Available | Positive | 3182162 - 3184795 | 100368.0 |
| rna-splicing ligase rtcb | BXT93_16595 | Not Available | Negative | 3184936 - 3186336 | 51205.4 |
Pathways
493 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





