Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflk | BXT93_16385 | Not Available | Negative | 3149734 - 3150993 | 45547.5 |
| gtpase hflx | BXT93_16390 | Not Available | Negative | 3151079 - 3152359 | 48329.0 |
| rna-binding protein hfq | BXT93_16395 | Not Available | Negative | 3152436 - 3152744 | 11167.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BXT93_16400 | Not Available | Negative | 3152830 - 3153780 | 35081.2 |
| dna mismatch repair protein mutl | BXT93_16405 | Not Available | Negative | 3153773 - 3155620 | 67922.5 |
| n-acetylmuramoyl-l-alanine amidase amib | BXT93_16410 | Not Available | Negative | 3155630 - 3156967 | 47930.9 |
| trna (n6-adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase tsae | BXT93_16415 | Not Available | Negative | 3156986 - 3157447 | 16854.0 |
| bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | BXT93_16420 | Not Available | Negative | 3157419 - 3158966 | 54625.4 |
| trna epoxyqueuosine(34) reductase queg | BXT93_16425 | Not Available | Positive | 3158965 - 3160104 | 43160.5 |
| Trna-gly | Not Available | Not Available | Positive | 3160374 - 3160449 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





