Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | BXT93_14225 | Not Available | Positive | 2740206 - 2740769 | 21214.8 |
| type ii secretion system protein gspi | BXT93_14230 | Not Available | Positive | 2740766 - 2741137 | 13592.2 |
| type ii secretion system protein gspj | BXT93_14235 | Not Available | Positive | 2741134 - 2741739 | 22362.3 |
| type ii secretion system protein | BXT93_14240 | Not Available | Positive | 2741736 - 2742713 | 36530.3 |
| type ii secretion system protein gspl | BXT93_14245 | Not Available | Positive | 2742710 - 2743888 | 44225.4 |
| general secretion pathway protein | BXT93_14250 | Not Available | Positive | 2743890 - 2744426 | 20346.6 |
| shufflon protein d' | BXT93_14255 | Not Available | Positive | 2744738 - 2744956 | 7988.18 |
| shufflon protein c' | BXT93_14260 | Not Available | Positive | 2745061 - 2745216 | 5595.65 |
| shufflon protein c | BXT93_14265 | Not Available | Negative | 2745213 - 2745524 | 11543.3 |
| prepilin, shufflon protein a | BXT93_14270 | Not Available | Positive | 2745445 - 2745840 | 13226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





