Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase | BXT93_12610 | Not Available | Positive | 2401125 - 2401241 | 4750.45 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | BXT93_12615 | Not Available | Positive | 2401222 - 2403819 | 93463.3 |
| upf0231 family protein | BXT93_12620 | Not Available | Positive | 2403995 - 2404357 | 13942.3 |
| s-adenosylmethionine decarboxylase proenzyme | BXT93_12625 | Not Available | Negative | 2404395 - 2405189 | 30386.3 |
| polyamine aminopropyltransferase | BXT93_12630 | Not Available | Negative | 2405205 - 2406071 | 32309.1 |
| chaperone lipoprotein yacc, potentially involved in protein secretion | BXT93_12635 | Not Available | Negative | 2406177 - 2406695 | 19475.6 |
| multicopper oxidase | BXT93_12640 | Not Available | Positive | 2406690 - 2407499 | 29311.2 |
| hypothetical protein | BXT93_12650 | Not Available | Negative | 2409599 - 2410066 | 18530.9 |
| type iv secretion protein rhs | BXT93_12655 | Not Available | Negative | 2410063 - 2414196 | 154799.0 |
| hypothetical protein | BXT93_12660 | Not Available | Negative | 2414217 - 2414660 | 16368.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





