Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| log family protein ygdh | BXT93_11695 | Not Available | Negative | 2226861 - 2228225 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | BXT93_11700 | Not Available | Negative | 2228337 - 2229185 | 32531.1 |
| protein syd | BXT93_11705 | Not Available | Positive | 2229253 - 2229798 | 20679.5 |
| hypothetical protein | BXT93_11710 | Not Available | Positive | 2230033 - 2230173 | 5490.66 |
| hypothetical protein | BXT93_11715 | Not Available | Positive | 2230420 - 2230749 | 12821.2 |
| trna pseudouridine(65) synthase truc | BXT93_11720 | Not Available | Positive | 2230749 - 2231531 | 29667.5 |
| flavodoxin | BXT93_11725 | Not Available | Positive | 2231549 - 2231998 | 16284.1 |
| mfs transporter | BXT93_11730 | Not Available | Positive | 2232433 - 2233785 | 49145.0 |
| glucarate dehydratase | BXT93_11735 | Not Available | Positive | 2233787 - 2235127 | 48883.4 |
| glucarate dehydratase | BXT93_11740 | Not Available | Positive | 2235148 - 2236488 | 49184.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





