Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit b | BXT93_09090 | Not Available | Positive | 1737342 - 1739360 | 72701.6 |
| hydrogenase 3 membrane subunit | BXT93_09095 | Not Available | Positive | 1739371 - 1740318 | 34387.4 |
| hydrogenase-4 component d | BXT93_09100 | Not Available | Positive | 1740335 - 1741774 | 51775.7 |
| hydrogenase 4 membrane subunit | BXT93_09105 | Not Available | Positive | 1741786 - 1742436 | 23409.0 |
| hydrogenase | BXT93_09110 | Not Available | Positive | 1742441 - 1744021 | 56625.4 |
| hydrogenase large subunit | BXT93_09115 | Not Available | Positive | 1744011 - 1745726 | 65076.1 |
| hydrogenase 4 subunit h | BXT93_09120 | Not Available | Positive | 1745736 - 1746281 | 20144.4 |
| formate hydrogenlyase | BXT93_09125 | Not Available | Positive | 1746278 - 1747036 | 28102.9 |
| formate hydrogenlyase maturation protein hych | BXT93_09130 | Not Available | Positive | 1747029 - 1747442 | 15538.7 |
| hydrogenase | BXT93_09135 | Not Available | Positive | 1747472 - 1749484 | 75310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





