Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ICBEcBL-II-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232445 bp
Thymine Count
1231303 bp
Guanine Count
1255900 bp
Cytosine Count
1252694 bp
Genome Length
4972342 bp
Protein-coding Genes
5228 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompw | BXT93_05685 | Not Available | Positive | 1067340 - 1067978 | 22945.1 |
| ycie/ycif family protein | BXT93_05690 | Not Available | Negative | 1068038 - 1068544 | 18986.5 |
| hypothetical protein | BXT93_05700 | Not Available | Negative | 1069174 - 1069353 | 6002.69 |
| tryptophan synthase subunit alpha | BXT93_05705 | Not Available | Negative | 1069734 - 1070540 | 28755.8 |
| tryptophan synthase subunit beta | BXT93_05710 | Not Available | Negative | 1070540 - 1071733 | 43000.6 |
| bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | BXT93_05715 | Not Available | Negative | 1071745 - 1073106 | 49446.0 |
| hypothetical protein | BXT93_05720 | Not Available | Negative | 1073107 - 1073313 | 7265.61 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BXT93_05725 | Not Available | Negative | 1073314 - 1073656 | 12332.0 |
| fimbrial protein | BXT93_05730 | Not Available | Negative | 1073770 - 1075020 | 45285.7 |
| fimbrial protein staf | BXT93_05735 | Not Available | Negative | 1075072 - 1075671 | 21394.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





