Caballeronia sordidicola strain PAMC 26633 BSU0408011

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Caballeronia

Description

Caballeronia sordidicola strain PAMC 26633 BSU0408011 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for having a single replicon, indicating a streamlined genomic structure. The genomic data for this strain can be accessed under the accession number MTHB00000000.1. The classification of Caballeronia sordidicola falls within a genus known for its association with various ecological niches, particularly in soil and plant environments. The Gram-negative nature of this bacterium suggests that it possesses an outer membrane, which can contribute to its survival in diverse conditions, as well as influence its interactions with other microorganisms and the environment. Understanding the characteristics of Caballeronia sordidicola strain PAMC 26633 BSU0408011 is essential for exploring its potential ecological roles, especially in nutrient cycling or plant interactions. The single replicon may also reflect a specialization that could allow this strain to thrive in specific habitats, making it of interest for further ecological and microbiological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCaballeronia
SpeciesCaballeronia sordidicola
Strainstrain PAMC 26633 BSU0408011

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caballeronia sordidicola strain PAMC 26633 BSU0408011, whole

Gene Summary

Adenine Count

1972899 bp

Thymine Count

1972094 bp

Guanine Count

2896560 bp

Cytosine Count

2905016 bp

Genome Length

9746569 bp

Protein-coding Genes

9390 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-type zinc finger protein, dksa/trar familyBSU04_46575Not AvailableNegative9614654 - 961507316154.2
hypothetical proteinBSU04_46580Not AvailableNegative9615070 - 96151834051.73
hypothetical proteinBSU04_46585Not AvailableNegative9615264 - 96153924739.66
metal chaperone involved in zn homeostasisBSU04_46590Not AvailableNegative9615849 - 961693440541.2
lsu m5c1962 methyltransferase rlmiBSU04_46595Not AvailableNegative9617119 - 961832144042.6
site-specific tyrosine recombinaseBSU04_46600Not AvailableNegative9618529 - 961944933844.5
hypothetical proteinBSU04_46605Not AvailableNegative9619451 - 962018526765.7
diaminopimelate epimeraseBSU04_46610Not AvailableNegative9620199 - 962108331422.7
lipid a biosynthesis lauroyl acyltransferaseBSU04_46615Not AvailableNegative9621193 - 962207733729.9
s-adenosylmethionine synthetaseBSU04_46620Not AvailablePositive9622371 - 962355842863.9

Displaying genes 9311 – 9320 of 9445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.