Diaphorobacter sp. LR2014-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Diaphorobacter

Description

Diaphorobacter sp. LR2014-1 is characterized by having a single replicon, which implies a streamlined genetic structure conducive to its adaptability and metabolic functions. The strain is cataloged under the accession number MTBE00000000.1, facilitating its identification and further research within microbial databases. Diaphorobacter species are generally known for their role in bioremediation, particularly in environments contaminated with organic pollutants. This genus is capable of utilizing various carbon sources, which enhances its potential in degrading environmental contaminants. The presence of a single replicon in Diaphorobacter sp. LR2014-1 may reflect an evolutionary adaptation that allows for efficient replication and metabolic regulation in challenging environments. The ecological significance of Diaphorobacter sp. LR2014-1 lies in its potential application in bioremediation strategies. Its ability to degrade pollutants suggests a vital role in maintaining ecosystem health, particularly in areas affected by industrial activities. By efficiently breaking down harmful substances, this strain could contribute to the restoration of contaminated habitats, highlighting the importance of microbial diversity in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDiaphorobacter
SpeciesDiaphorobacter sp. LR2014-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Diaphorobacter sp. LR2014-1 LR2014-1_scaffold87, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4176 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBV908_19135Not AvailableNegative4016829 - 401712510936.4
hypothetical proteinBV908_19140Not AvailableNegative4017531 - 401856536103.5
lysr family transcriptional regulatorBV908_19145Not AvailableNegative4019029 - 401994032569.2
molybdenum abc transporter substrate-binding proteinBV908_19150Not AvailablePositive4020066 - 402072522294.7
4-oxalomesaconate hydrataseBV908_19155Not AvailablePositive4020759 - 402179338606.2
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylaseBV908_19160Not AvailablePositive4021795 - 402247823870.9
tctcBV908_19165Not AvailablePositive4022577 - 402358135588.6
2-pyrone-4,6-dicarboxylate hydrolaseBV908_19170Not AvailablePositive4023616 - 402454234687.6
protocatechuate 4,5-dioxygenase subunit alphaBV908_19175Not AvailablePositive4024545 - 402500917301.5
protocatechuate 3,4-dioxygenaseBV908_19180Not AvailablePositive4025020 - 402588631366.6

Displaying genes 3721 – 3730 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.