Diaphorobacter sp. LR2014-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Diaphorobacter

Description

Diaphorobacter sp. LR2014-1 is characterized by having a single replicon, which implies a streamlined genetic structure conducive to its adaptability and metabolic functions. The strain is cataloged under the accession number MTBE00000000.1, facilitating its identification and further research within microbial databases. Diaphorobacter species are generally known for their role in bioremediation, particularly in environments contaminated with organic pollutants. This genus is capable of utilizing various carbon sources, which enhances its potential in degrading environmental contaminants. The presence of a single replicon in Diaphorobacter sp. LR2014-1 may reflect an evolutionary adaptation that allows for efficient replication and metabolic regulation in challenging environments. The ecological significance of Diaphorobacter sp. LR2014-1 lies in its potential application in bioremediation strategies. Its ability to degrade pollutants suggests a vital role in maintaining ecosystem health, particularly in areas affected by industrial activities. By efficiently breaking down harmful substances, this strain could contribute to the restoration of contaminated habitats, highlighting the importance of microbial diversity in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDiaphorobacter
SpeciesDiaphorobacter sp. LR2014-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Diaphorobacter sp. LR2014-1 LR2014-1_scaffold87, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4176 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4,5-dopa dioxygenase extradiolBV908_16625Not AvailablePositive3515840 - 351673632559.3
aromatic amino acid aminotransferaseBV908_16630Not AvailableNegative3516845 - 351804142648.4
excinuclease abc subunit bBV908_16635Not AvailablePositive3518150 - 352024679386.7
fe-s cluster assembly transcriptional regulator iscrBV908_16640Not AvailablePositive3520482 - 352101819365.4
iscs subfamily cysteine desulfuraseBV908_16645Not AvailablePositive3521123 - 352234345055.1
iron-sulfur cluster scaffold-like proteinBV908_16650Not AvailablePositive3522381 - 352278213969.5
iron-sulfur cluster assembly protein iscaBV908_16655Not AvailablePositive3522788 - 352311111880.1
fe-s protein assembly co-chaperone hscbBV908_16660Not AvailablePositive3523180 - 352369819651.2
fe-s protein assembly chaperone hscaBV908_16665Not AvailablePositive3523765 - 352563365391.6
ferredoxin, 2fe-2s type, isc systemBV908_16670Not AvailablePositive3525670 - 352600812330.5

Displaying genes 3241 – 3250 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.