Diaphorobacter sp. LR2014-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Diaphorobacter

Description

Diaphorobacter sp. LR2014-1 is characterized by having a single replicon, which implies a streamlined genetic structure conducive to its adaptability and metabolic functions. The strain is cataloged under the accession number MTBE00000000.1, facilitating its identification and further research within microbial databases. Diaphorobacter species are generally known for their role in bioremediation, particularly in environments contaminated with organic pollutants. This genus is capable of utilizing various carbon sources, which enhances its potential in degrading environmental contaminants. The presence of a single replicon in Diaphorobacter sp. LR2014-1 may reflect an evolutionary adaptation that allows for efficient replication and metabolic regulation in challenging environments. The ecological significance of Diaphorobacter sp. LR2014-1 lies in its potential application in bioremediation strategies. Its ability to degrade pollutants suggests a vital role in maintaining ecosystem health, particularly in areas affected by industrial activities. By efficiently breaking down harmful substances, this strain could contribute to the restoration of contaminated habitats, highlighting the importance of microbial diversity in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDiaphorobacter
SpeciesDiaphorobacter sp. LR2014-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Diaphorobacter sp. LR2014-1 LR2014-1_scaffold87, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4176 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertase yidcBV908_01350Not AvailablePositive283661 - 28537063032.0
abc transporter substrate-binding proteinBV908_01355Not AvailablePositive285501 - 28708758709.3
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeBV908_01360Not AvailablePositive287306 - 28870949662.2
crp/fnr family transcriptional regulatorBV908_01365Not AvailablePositive288797 - 28928817524.1
hypothetical proteinBV908_01370Not AvailablePositive289426 - 29026529284.0
adenine phosphoribosyltransferaseBV908_01375Not AvailableNegative290569 - 29112320131.5
potassium transporterBV908_01380Not AvailableNegative291194 - 29317971091.6
arabinose-5-phosphate isomeraseBV908_01385Not AvailablePositive293228 - 29422934664.9
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseBV908_01390Not AvailablePositive294229 - 29480720268.5
lps export abc transporter periplasmic protein lptcBV908_01395Not AvailablePositive294804 - 29542423418.8

Displaying genes 271 – 280 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.