Diaphorobacter sp. LR2014-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Diaphorobacter

Description

Diaphorobacter sp. LR2014-1 is characterized by having a single replicon, which implies a streamlined genetic structure conducive to its adaptability and metabolic functions. The strain is cataloged under the accession number MTBE00000000.1, facilitating its identification and further research within microbial databases. Diaphorobacter species are generally known for their role in bioremediation, particularly in environments contaminated with organic pollutants. This genus is capable of utilizing various carbon sources, which enhances its potential in degrading environmental contaminants. The presence of a single replicon in Diaphorobacter sp. LR2014-1 may reflect an evolutionary adaptation that allows for efficient replication and metabolic regulation in challenging environments. The ecological significance of Diaphorobacter sp. LR2014-1 lies in its potential application in bioremediation strategies. Its ability to degrade pollutants suggests a vital role in maintaining ecosystem health, particularly in areas affected by industrial activities. By efficiently breaking down harmful substances, this strain could contribute to the restoration of contaminated habitats, highlighting the importance of microbial diversity in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDiaphorobacter
SpeciesDiaphorobacter sp. LR2014-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Diaphorobacter sp. LR2014-1 LR2014-1_scaffold87, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4176 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseBV908_13690Not AvailableNegative2913614 - 291620592682.6
hypothetical proteinBV908_13695Not AvailableNegative2916320 - 291694021551.0
coa ester lyaseBV908_13700Not AvailableNegative2917000 - 291801035983.9
trans-aconitate 2-methyltransferaseBV908_13705Not AvailableNegative2918007 - 291878328798.6
malate dehydrogenaseBV908_13710Not AvailableNegative2918796 - 291978234813.9
gntr family transcriptional regulatorBV908_13715Not AvailablePositive2919984 - 292077228794.7
succinate dehydrogenase, cytochrome b556 subunitBV908_13720Not AvailablePositive2920912 - 292134616183.1
succinate dehydrogenase, hydrophobic membrane anchor proteinBV908_13725Not AvailablePositive2921390 - 292175513766.2
succinate dehydrogenase flavoprotein subunitBV908_13730Not AvailablePositive2921778 - 292358365672.0
succinate dehydrogenase iron-sulfur subunitBV908_13735Not AvailablePositive2923614 - 292431826719.4

Displaying genes 2671 – 2680 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.