Diaphorobacter sp. LR2014-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Diaphorobacter

Description

Diaphorobacter sp. LR2014-1 is characterized by having a single replicon, which implies a streamlined genetic structure conducive to its adaptability and metabolic functions. The strain is cataloged under the accession number MTBE00000000.1, facilitating its identification and further research within microbial databases. Diaphorobacter species are generally known for their role in bioremediation, particularly in environments contaminated with organic pollutants. This genus is capable of utilizing various carbon sources, which enhances its potential in degrading environmental contaminants. The presence of a single replicon in Diaphorobacter sp. LR2014-1 may reflect an evolutionary adaptation that allows for efficient replication and metabolic regulation in challenging environments. The ecological significance of Diaphorobacter sp. LR2014-1 lies in its potential application in bioremediation strategies. Its ability to degrade pollutants suggests a vital role in maintaining ecosystem health, particularly in areas affected by industrial activities. By efficiently breaking down harmful substances, this strain could contribute to the restoration of contaminated habitats, highlighting the importance of microbial diversity in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDiaphorobacter
SpeciesDiaphorobacter sp. LR2014-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Diaphorobacter sp. LR2014-1 LR2014-1_scaffold87, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4176 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv-a pilus assembly atpase pilbBV908_08110Not AvailablePositive1714492 - 171622563632.7
type ii secretion system protein fBV908_08115Not AvailablePositive1716246 - 171746344410.1
prepilin peptidaseBV908_08120Not AvailablePositive1717463 - 171834431472.9
dephospho-coa kinaseBV908_08125Not AvailablePositive1718346 - 171896922051.6
cell division protein zapdBV908_08130Not AvailablePositive1719060 - 171981528400.2
dna gyrase inhibitor yacgBV908_08135Not AvailablePositive1719822 - 17200528280.67
7,8-dihydro-8-oxoguanine-triphosphataseBV908_08140Not AvailableNegative1720121 - 172056716765.0
aaa family atpaseBV908_08145Not AvailableNegative1720564 - 172144232145.1
bifunctional ornithine acetyltransferase/n-acetylglutamate synthaseBV908_08150Not AvailableNegative1721497 - 172272643053.6
preprotein translocase subunit secaBV908_08155Not AvailableNegative1722827 - 1725580102696.0

Displaying genes 1591 – 1600 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.