Helicobacter pylori strain PZ5009-3A2

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PZ5009-3A2 is a gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. This strain is notable for its presence in various hosts, including Homo sapiens, Gallus gallus, and several other mammals and birds, indicating a broad ecological niche. It is free-living yet primarily associated with the gastric environments of its hosts, where it can lead to significant health complications. The bacterium possesses one replicon and has a distinctive double membrane structure. Its optimal growth temperature is 37°C, fitting within the mesophilic temperature range. The strain is immobile but features flagella, which may play a role in its colonization of host tissues. Helicobacter pylori is widely recognized for its pathogenicity in humans, being implicated in several gastrointestinal diseases. It is associated with chronic gastric inflammation, various forms of gastric ulcers, and more severe conditions such as gastric cancer and mucosa-associated lymphoid tissue lymphoma. The bacterium's presence can lead to asymptomatic mucosal inflammatory responses and conditions like hypochlorhydria and chronic gastritis. This strain exemplifies the complex interplay between a pathogen and its host, demonstrating how H. pylori can thrive in the gastric environment while contributing to significant health challenges, including peptic ulcer disease and gastric cancer. Understanding its traits and impacts underscores the importance of monitoring and managing H. pylori infections in human health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PZ5009-3A2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PZ5009-3A2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PZ5009-3A2 PZ5009-contig81, whole

Gene Summary

Adenine Count

505804 bp

Thymine Count

507269 bp

Guanine Count

323741 bp

Cytosine Count

320281 bp

Genome Length

1658224 bp

Protein-coding Genes

1484 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-argNot AvailableNot AvailablePositive1354634 - 1354710Not Available
mechanosensitive ion channel proteinBV499_06800Not AvailablePositive1355306 - 135717771278.9
sam-dependent methyltransferaseBV499_06805Not AvailableNegative1357180 - 135834945421.7
methionine--trna ligaseBV499_06810Not AvailablePositive1358519 - 136047474807.4
ferrochelataseBV499_06815Not AvailablePositive1360475 - 136149439276.1
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobBV499_06820Not AvailablePositive1361498 - 136229530358.1
thioesteraseBV499_06825Not AvailablePositive1362299 - 136272716116.5
glycosyl transferase family 1BV499_06830Not AvailablePositive1362732 - 136390144952.5
arginine decarboxylaseBV499_06835Not AvailablePositive1363915 - 136576270237.1
hypothetical proteinBV499_06840Not AvailableNegative1365911 - 136679833538.0

Displaying genes 1261 – 1270 of 1526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total