Deinococcus marmoris strain PAMC 26562

sphereaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus marmoris strain PAMC 26562 is a Gram-positive, aerobic bacterium characterized by its spherical shape and non-motile nature. The strain is notable for its psychrotolerant properties, thriving optimally at a temperature of 16°C while capable of surviving across a range of lower temperatures. This adaptability to cold environments positions D. marmoris as an organism of interest in studies related to microbial life in polar and other cold ecosystems. Genetically, strain PAMC 26562 contains a single replicon, indicating a streamlined genetic structure. The presence of flagella, despite its non-motile status, suggests potential adaptations for stationary behavior or interaction with its environment, although the exact role of the flagella in this context remains to be elucidated. The accession number for this strain is MSTI00000000.1, which allows for further exploration and study within microbial databases. Given its unique traits and ecological niche, Deinococcus marmoris strain PAMC 26562 may play a significant role in biogeochemical cycles in cold habitats, contributing to the understanding of microbial resilience and function in extreme environments. Its ability to endure low temperatures may also offer insights into potential applications in biotechnology, particularly in processes requiring cold-active enzymes.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus marmoris
Strainstrain PAMC 26562

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus marmoris strain PAMC 26562
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus marmoris strain PAMC 26562 contig-10000002, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s)BOO71_0012997Not AvailablePositive4499963 - 450165461901.7
hypothetical proteinBOO71_0013000Not AvailableNegative4501728 - 450261231367.8
hypothetical proteinBOO71_0013003Not AvailableNegative4502995 - 450341415631.6
glyoxalase family proteinBOO71_0013006Not AvailableNegative4503470 - 450412023015.0
ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycationBOO71_0013009Not AvailableNegative4504401 - 450528531988.2
hypothetical proteinBOO71_0013012Not AvailablePositive4505470 - 450695152218.7
methylmalonyl coa epimeraseBOO71_0013015Not AvailablePositive4506997 - 450741915209.0
membrane spanning proteinBOO71_0013018Not AvailablePositive4507416 - 450781714863.6
5-keto-d-gluconate 5-reductaseBOO71_0013024Not AvailableNegative4508564 - 450932226362.8
gluconate utilization system gnt-i transcriptional repressorBOO71_0013027Not AvailablePositive4509541 - 451062038975.0

Displaying genes 4331 – 4340 of 5081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.