Deinococcus marmoris strain PAMC 26562

sphereaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus marmoris strain PAMC 26562 is a Gram-positive, aerobic bacterium characterized by its spherical shape and non-motile nature. The strain is notable for its psychrotolerant properties, thriving optimally at a temperature of 16°C while capable of surviving across a range of lower temperatures. This adaptability to cold environments positions D. marmoris as an organism of interest in studies related to microbial life in polar and other cold ecosystems. Genetically, strain PAMC 26562 contains a single replicon, indicating a streamlined genetic structure. The presence of flagella, despite its non-motile status, suggests potential adaptations for stationary behavior or interaction with its environment, although the exact role of the flagella in this context remains to be elucidated. The accession number for this strain is MSTI00000000.1, which allows for further exploration and study within microbial databases. Given its unique traits and ecological niche, Deinococcus marmoris strain PAMC 26562 may play a significant role in biogeochemical cycles in cold habitats, contributing to the understanding of microbial resilience and function in extreme environments. Its ability to endure low temperatures may also offer insights into potential applications in biotechnology, particularly in processes requiring cold-active enzymes.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus marmoris
Strainstrain PAMC 26562

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus marmoris strain PAMC 26562
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus marmoris strain PAMC 26562 contig-10000002, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase, molybdenum binding subunitBOO71_0012640Not AvailableNegative4384598 - 438695584731.2
xanthine dehydrogenase, iron-sulfur cluster and fad-binding subunit aBOO71_0012643Not AvailableNegative4387010 - 438843150911.8
hypothetical proteinBOO71_0012646Not AvailableNegative4388666 - 438900712177.4
two-component oxygen-sensor histidine kinase fixlBOO71_0012649Not AvailablePositive4389329 - 439120366047.6
transcriptional regulatory protein fixjBOO71_0012652Not AvailablePositive4391196 - 439184323660.6
dihydrofolate reductaseBOO71_0012655Not AvailablePositive4391836 - 43919675086.92
dihydrofolate reductaseBOO71_0012658Not AvailablePositive4392155 - 439255313941.8
aminoglycoside n3-acetyltransferaseBOO71_0012661Not AvailablePositive4392672 - 439348728946.1
extracellular protein containing predicted 35aa signal peptideBOO71_0012664Not AvailablePositive4393573 - 439409716913.5
ankyrin repeat proteinBOO71_0012667Not AvailablePositive4394099 - 439481524972.1

Displaying genes 4211 – 4220 of 5081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.