Deinococcus marmoris strain PAMC 26562

sphereaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus marmoris strain PAMC 26562 is a Gram-positive, aerobic bacterium characterized by its spherical shape and non-motile nature. The strain is notable for its psychrotolerant properties, thriving optimally at a temperature of 16°C while capable of surviving across a range of lower temperatures. This adaptability to cold environments positions D. marmoris as an organism of interest in studies related to microbial life in polar and other cold ecosystems. Genetically, strain PAMC 26562 contains a single replicon, indicating a streamlined genetic structure. The presence of flagella, despite its non-motile status, suggests potential adaptations for stationary behavior or interaction with its environment, although the exact role of the flagella in this context remains to be elucidated. The accession number for this strain is MSTI00000000.1, which allows for further exploration and study within microbial databases. Given its unique traits and ecological niche, Deinococcus marmoris strain PAMC 26562 may play a significant role in biogeochemical cycles in cold habitats, contributing to the understanding of microbial resilience and function in extreme environments. Its ability to endure low temperatures may also offer insights into potential applications in biotechnology, particularly in processes requiring cold-active enzymes.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus marmoris
Strainstrain PAMC 26562

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus marmoris strain PAMC 26562
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus marmoris strain PAMC 26562 contig-10000002, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
magnesium and cobalt transport protein coraBOO71_0001195Not AvailableNegative393808 - 39474335197.8
rela/spotBOO71_0001198Not AvailableNegative395056 - 39616841368.6
n-acetylmuramoyl-l-alanine amidaseBOO71_0001201Not AvailablePositive396232 - 39813665695.9
mobile element proteinBOO71_0001204Not AvailablePositive398311 - 39874516345.7
mobile element proteinBOO71_0001207Not AvailablePositive398732 - 3989568618.64
heat shock protein 60 family chaperone groelBOO71_0001210Not AvailableNegative400541 - 40218457854.5
heat shock protein 60 family co-chaperone groesBOO71_0001213Not AvailableNegative402258 - 40254510272.4
ggdef family proteinBOO71_0001216Not AvailablePositive402795 - 40340022365.7
pp_00401BOO71_0001219Not AvailablePositive403397 - 404035Not Available
cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains proteinBOO71_0001222Not AvailablePositive404032 - 40467022719.2

Displaying genes 411 – 420 of 5081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.