Deinococcus marmoris strain PAMC 26562

sphereaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus marmoris strain PAMC 26562 is a Gram-positive, aerobic bacterium characterized by its spherical shape and non-motile nature. The strain is notable for its psychrotolerant properties, thriving optimally at a temperature of 16°C while capable of surviving across a range of lower temperatures. This adaptability to cold environments positions D. marmoris as an organism of interest in studies related to microbial life in polar and other cold ecosystems. Genetically, strain PAMC 26562 contains a single replicon, indicating a streamlined genetic structure. The presence of flagella, despite its non-motile status, suggests potential adaptations for stationary behavior or interaction with its environment, although the exact role of the flagella in this context remains to be elucidated. The accession number for this strain is MSTI00000000.1, which allows for further exploration and study within microbial databases. Given its unique traits and ecological niche, Deinococcus marmoris strain PAMC 26562 may play a significant role in biogeochemical cycles in cold habitats, contributing to the understanding of microbial resilience and function in extreme environments. Its ability to endure low temperatures may also offer insights into potential applications in biotechnology, particularly in processes requiring cold-active enzymes.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus marmoris
Strainstrain PAMC 26562

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus marmoris strain PAMC 26562
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus marmoris strain PAMC 26562 contig-10000002, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit betaBOO71_0010300Not AvailableNegative3581939 - 358304839756.0
cysteine desulfuraseBOO71_0010303Not AvailableNegative3583045 - 358417840087.5
aminopeptidase ypdf (mp-, ma-, ms-, ap-, np- specific)BOO71_0010306Not AvailableNegative3584168 - 358525638208.8
aminopeptidase ypdf (mp-, ma-, ms-, ap-, np- specific)BOO71_0010309Not AvailableNegative3585244 - 358641042191.2
aminopeptidase ypdf (mp-, ma-, ms-, ap-, np- specific)BOO71_0010312Not AvailablePositive3586655 - 358782143081.9
oligopeptide abc transporter, periplasmic oligopeptide-binding protein oppaBOO71_0010315Not AvailablePositive3587875 - 358950959321.1
oligopeptide transport system permease protein oppbBOO71_0010318Not AvailablePositive3589514 - 359047934806.2
peptide abc transporter, permease proteinBOO71_0010321Not AvailablePositive3590476 - 359135731243.8
transcriptional regulator, merr familyBOO71_0010324Not AvailablePositive3591392 - 359192219297.2
aminopeptidase s (leu, val, phe, tyr preference)BOO71_0010327Not AvailablePositive3591965 - 359318844307.7

Displaying genes 3431 – 3440 of 5081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.