Deinococcus marmoris strain PAMC 26562

sphereaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus marmoris strain PAMC 26562 is a Gram-positive, aerobic bacterium characterized by its spherical shape and non-motile nature. The strain is notable for its psychrotolerant properties, thriving optimally at a temperature of 16°C while capable of surviving across a range of lower temperatures. This adaptability to cold environments positions D. marmoris as an organism of interest in studies related to microbial life in polar and other cold ecosystems. Genetically, strain PAMC 26562 contains a single replicon, indicating a streamlined genetic structure. The presence of flagella, despite its non-motile status, suggests potential adaptations for stationary behavior or interaction with its environment, although the exact role of the flagella in this context remains to be elucidated. The accession number for this strain is MSTI00000000.1, which allows for further exploration and study within microbial databases. Given its unique traits and ecological niche, Deinococcus marmoris strain PAMC 26562 may play a significant role in biogeochemical cycles in cold habitats, contributing to the understanding of microbial resilience and function in extreme environments. Its ability to endure low temperatures may also offer insights into potential applications in biotechnology, particularly in processes requiring cold-active enzymes.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus marmoris
Strainstrain PAMC 26562

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus marmoris strain PAMC 26562
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus marmoris strain PAMC 26562 contig-10000002, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multimodular transpeptidase-transglycosylaseBOO71_0007690Not AvailableNegative2678244 - 268060484740.5
trna(cytosine32)-2-thiocytidine synthetaseBOO71_0007693Not AvailablePositive2680756 - 268164332593.3
hypothetical proteinBOO71_0007696Not AvailableNegative2681898 - 268233815216.2
folate-dependent protein for fe/s cluster synthesis/repair in oxidative stressBOO71_0007699Not AvailableNegative2682344 - 268321630776.6
glutamyl-trna reductaseBOO71_0007702Not AvailableNegative2683522 - 268462538694.3
uroporphyrinogen-iii methyltransferaseBOO71_0007705Not AvailableNegative2684622 - 268518219307.5
hypothetical proteinBOO71_0007708Not AvailableNegative2685407 - 268598220401.9
hypothetical proteinBOO71_0007711Not AvailablePositive2686209 - 268663113898.5
serine/threonine protein phosphataseBOO71_0007714Not AvailableNegative2686741 - 268747827378.3
nitrilotriacetate monooxygenase component bBOO71_0007717Not AvailableNegative2687813 - 268831618195.4

Displaying genes 2561 – 2570 of 5081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.