Mycolicibacterium porcinum strain HMC1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium porcinum strain HMC1 is characterized as a rod-shaped bacterium, which is important for its classification within the Mycolicibacterium genus. This strain possesses flagella, indicating that it has the capability for motility, which may be significant for its environmental interactions or host colonization. This bacterium is noted to have a single replicon, suggesting a streamlined genetic organization that could impact its replication and overall genomic stability. The host associated with Mycolicibacterium porcinum strain HMC1 is Connochaetes gnou, commonly known as the blue wildebeest. This association highlights the potential ecological roles the bacterium may play within its host's microbiome or its contribution to the health and disease dynamics of the wildebeest population. The genomic data for this strain is cataloged under the accession number MSTD00000000.1, providing a reference point for researchers interested in studying its genetic makeup further. Understanding the specific traits of Mycolicibacterium porcinum strain HMC1 can contribute to a broader comprehension of its ecological niche, particularly in relation to its host. This relationship suggests that the bacterium may have adapted to thrive in the gut microbiome of the blue wildebeest, potentially influencing the host's digestion and nutrient absorption. Further studies could elucidate the specific roles of this bacterium in its habitat and its interactions with the wildebeest, contributing to our understanding of microbiome dynamics in wildlife.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium porcinum
Strainstrain HMC1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Connochaetes gnou
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium porcinum strain HMC1 PROKKA_contig000100, whole

Gene Summary

Adenine Count

1037553 bp

Thymine Count

1035266 bp

Guanine Count

2078970 bp

Cytosine Count

2087757 bp

Genome Length

6240140 bp

Protein-coding Genes

5866 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease accessory protein urefBVU76_20045Not AvailableNegative4150969 - 415160421728.7
urease subunit alphaBVU76_20050Not AvailableNegative4151605 - 415332660594.6
urease subunit betaBVU76_20055Not AvailableNegative4153358 - 415366910712.9
urease subunit gammaBVU76_20060Not AvailableNegative4153673 - 415397511131.4
esteraseBVU76_20065Not AvailableNegative4154036 - 415444014360.2
iron reductaseBVU76_20070Not AvailableNegative4154597 - 415536727515.4
transcriptional regulatorBVU76_20075Not AvailablePositive4155590 - 415600615317.3
zn-dependent protease with chaperone functionBVU76_20080Not AvailablePositive4156021 - 415699233994.2
phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating)BVU76_20085Not AvailablePositive4157044 - 415849851761.3
inosine 5-monophosphate dehydrogenaseBVU76_20090Not AvailablePositive4158599 - 416003549624.3

Displaying genes 3941 – 3950 of 5928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.