Mycolicibacterium porcinum strain HMC1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium porcinum strain HMC1 is characterized as a rod-shaped bacterium, which is important for its classification within the Mycolicibacterium genus. This strain possesses flagella, indicating that it has the capability for motility, which may be significant for its environmental interactions or host colonization. This bacterium is noted to have a single replicon, suggesting a streamlined genetic organization that could impact its replication and overall genomic stability. The host associated with Mycolicibacterium porcinum strain HMC1 is Connochaetes gnou, commonly known as the blue wildebeest. This association highlights the potential ecological roles the bacterium may play within its host's microbiome or its contribution to the health and disease dynamics of the wildebeest population. The genomic data for this strain is cataloged under the accession number MSTD00000000.1, providing a reference point for researchers interested in studying its genetic makeup further. Understanding the specific traits of Mycolicibacterium porcinum strain HMC1 can contribute to a broader comprehension of its ecological niche, particularly in relation to its host. This relationship suggests that the bacterium may have adapted to thrive in the gut microbiome of the blue wildebeest, potentially influencing the host's digestion and nutrient absorption. Further studies could elucidate the specific roles of this bacterium in its habitat and its interactions with the wildebeest, contributing to our understanding of microbiome dynamics in wildlife.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium porcinum
Strainstrain HMC1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Connochaetes gnou
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium porcinum strain HMC1 PROKKA_contig000100, whole

Gene Summary

Adenine Count

1037553 bp

Thymine Count

1035266 bp

Guanine Count

2078970 bp

Cytosine Count

2087757 bp

Genome Length

6240140 bp

Protein-coding Genes

5866 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arac family transcriptional regulatorBVU76_18980Not AvailablePositive3933982 - 393496535113.6
glutamine amidotransferaseBVU76_18985Not AvailablePositive3934977 - 393570225448.9
bromoperoxidaseBVU76_18990Not AvailablePositive3935740 - 393654029191.0
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseBVU76_18995Not AvailablePositive3936558 - 393818356607.6
duf3592 domain-containing proteinBVU76_19000Not AvailablePositive3938180 - 393870118964.3
protein-disulfide isomeraseBVU76_19005Not AvailableNegative3938685 - 393935022952.4
alpha-mannosyltransferaseBVU76_19010Not AvailablePositive3939467 - 394059440549.9
alpha/beta hydrolaseBVU76_19015Not AvailableNegative3940618 - 394145430776.2
aconitate hydrataseBVU76_19020Not AvailableNegative3941502 - 394345769634.6
short-chain dehydrogenase/reductaseBVU76_19025Not AvailableNegative3943498 - 394432229511.6

Displaying genes 3731 – 3740 of 5928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.