Mycolicibacterium porcinum strain HMC1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium porcinum strain HMC1 is characterized as a rod-shaped bacterium, which is important for its classification within the Mycolicibacterium genus. This strain possesses flagella, indicating that it has the capability for motility, which may be significant for its environmental interactions or host colonization. This bacterium is noted to have a single replicon, suggesting a streamlined genetic organization that could impact its replication and overall genomic stability. The host associated with Mycolicibacterium porcinum strain HMC1 is Connochaetes gnou, commonly known as the blue wildebeest. This association highlights the potential ecological roles the bacterium may play within its host's microbiome or its contribution to the health and disease dynamics of the wildebeest population. The genomic data for this strain is cataloged under the accession number MSTD00000000.1, providing a reference point for researchers interested in studying its genetic makeup further. Understanding the specific traits of Mycolicibacterium porcinum strain HMC1 can contribute to a broader comprehension of its ecological niche, particularly in relation to its host. This relationship suggests that the bacterium may have adapted to thrive in the gut microbiome of the blue wildebeest, potentially influencing the host's digestion and nutrient absorption. Further studies could elucidate the specific roles of this bacterium in its habitat and its interactions with the wildebeest, contributing to our understanding of microbiome dynamics in wildlife.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium porcinum
Strainstrain HMC1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Connochaetes gnou
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium porcinum strain HMC1 PROKKA_contig000100, whole

Gene Summary

Adenine Count

1037553 bp

Thymine Count

1035266 bp

Guanine Count

2078970 bp

Cytosine Count

2087757 bp

Genome Length

6240140 bp

Protein-coding Genes

5866 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
enoyl-coa hydrataseBVU76_13750Not AvailableNegative2876295 - 287720932901.2
dna alkylation response proteinBVU76_13755Not AvailableNegative2877206 - 287883458829.2
inositol phosphorylceramide synthaseBVU76_13760Not AvailableNegative2878889 - 288000141018.7
deoxyribonuclease ivBVU76_13765Not AvailableNegative2880067 - 288081926559.1
dna-directed rna polymerase subunit beta'BVU76_13770Not AvailableNegative2880991 - 2884944146281.0
dna-directed rna polymerase subunit betaBVU76_13775Not AvailableNegative2884994 - 2888503128576.0
hypothetical proteinBVU76_13780Not AvailableNegative2888907 - 289001939204.2
abc transporter atp-binding proteinBVU76_13785Not AvailableNegative2890088 - 289117339197.3
50s ribosomal protein l7/l12BVU76_13790Not AvailableNegative2891376 - 289176513328.0
50s ribosomal protein l10BVU76_13795Not AvailableNegative2891842 - 289236918081.8

Displaying genes 2711 – 2720 of 5928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.