Phormidium tenue NIES-30

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Oscillatoriaceae

Genus

Phormidium

Description

Phormidium tenue NIES-30 is a cyanobacterial strain characterized by a single replicon and is classified under the accession number MRCG00000000.1. This organism is notable for its role in aquatic ecosystems, contributing to primary production and influencing nutrient cycling within its habitat. Phormidium tenue is part of the diverse group of filamentous cyanobacteria, which are known for their ability to perform photosynthesis and fix nitrogen. These traits play a critical role in maintaining ecological balance and supporting other forms of life in freshwater environments. The presence of a single replicon suggests a streamlined genomic structure, which may facilitate rapid adaptation to changing environmental conditions. The ecological significance of Phormidium tenue extends beyond its photosynthetic capabilities; it also serves as a food source for various aquatic organisms. As a primary producer, it forms the base of the food web, supporting higher trophic levels and contributing to overall biodiversity. Furthermore, the unique traits of this cyanobacterium make it an important subject for studies related to ecosystem health and the effects of environmental changes, such as nutrient inputs and climate variations. Understanding the biology and ecology of Phormidium tenue NIES-30 can provide insights into the functioning of freshwater ecosystems and the dynamics of microbial communities within them.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyOscillatoriaceae
GenusPhormidium
SpeciesPhormidium tenue
StrainNIES-30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phormidium tenue NIES-30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phormidium tenue NIES-30


Gene Summary

Adenine Count

1281330 bp

Thymine Count

1280957 bp

Guanine Count

1629634 bp

Cytosine Count

1629962 bp

Genome Length

5821893 bp

Protein-coding Genes

4990 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
photosystem ii protein psbqNIES30_07125Not AvailablePositive1562232 - 156267816562.0
fad-dependent oxidoreductaseNIES30_07130Not AvailablePositive1562700 - 156382740430.7
hypothetical proteinNIES30_07135Not AvailablePositive1563870 - 156441219974.0
duf2949 domain-containing proteinNIES30_07140Not AvailableNegative1564492 - 15646837187.68
hydroxyacid dehydrogenaseNIES30_07145Not AvailableNegative1565384 - 156626531263.2
abc transporter substrate-binding proteinNIES30_07155Not AvailableNegative1567262 - 156803527831.7
udp-galactopyranose mutaseNIES30_07160Not AvailablePositive1568237 - 157019271748.1
3-chlorobenzoate-3,4-dioxygenaseNIES30_07165Not AvailablePositive1570319 - 157137740338.9
haloacid dehalogenaseNIES30_07170Not AvailablePositive1571483 - 157230430115.9
hypothetical proteinNIES30_07175Not AvailablePositive1572499 - 157367739823.6

Displaying genes 1421 – 1430 of 5048 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.