Phormidium tenue NIES-30

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Oscillatoriaceae

Genus

Phormidium

Description

Phormidium tenue NIES-30 is a cyanobacterial strain characterized by a single replicon and is classified under the accession number MRCG00000000.1. This organism is notable for its role in aquatic ecosystems, contributing to primary production and influencing nutrient cycling within its habitat. Phormidium tenue is part of the diverse group of filamentous cyanobacteria, which are known for their ability to perform photosynthesis and fix nitrogen. These traits play a critical role in maintaining ecological balance and supporting other forms of life in freshwater environments. The presence of a single replicon suggests a streamlined genomic structure, which may facilitate rapid adaptation to changing environmental conditions. The ecological significance of Phormidium tenue extends beyond its photosynthetic capabilities; it also serves as a food source for various aquatic organisms. As a primary producer, it forms the base of the food web, supporting higher trophic levels and contributing to overall biodiversity. Furthermore, the unique traits of this cyanobacterium make it an important subject for studies related to ecosystem health and the effects of environmental changes, such as nutrient inputs and climate variations. Understanding the biology and ecology of Phormidium tenue NIES-30 can provide insights into the functioning of freshwater ecosystems and the dynamics of microbial communities within them.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyOscillatoriaceae
GenusPhormidium
SpeciesPhormidium tenue
StrainNIES-30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phormidium tenue NIES-30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phormidium tenue NIES-30


Gene Summary

Adenine Count

1281330 bp

Thymine Count

1280957 bp

Guanine Count

1629634 bp

Cytosine Count

1629962 bp

Genome Length

5821893 bp

Protein-coding Genes

4990 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNIES30_19020Not AvailableNegative4246552 - 424713620694.9
atp phosphoribosyltransferaseNIES30_19025Not AvailableNegative4247223 - 424787023359.4
ll-diaminopimelate aminotransferaseNIES30_19030Not AvailableNegative4247972 - 424920744979.1
phosphoribosylaminoimidazolesuccinocarboxamide synthaseNIES30_19035Not AvailablePositive4249457 - 425021828163.7
hypothetical proteinNIES30_19040Not AvailablePositive4250347 - 425272584710.8
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseNIES30_19045Not AvailablePositive4252755 - 425363630797.9
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzNIES30_19050Not AvailablePositive4253744 - 425423817955.2
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseNIES30_19055Not AvailablePositive4254287 - 425511129427.2
lipid-a-disaccharide synthaseNIES30_19060Not AvailablePositive4255131 - 425631542746.1
biopolymer transporter exbbNIES30_19065Not AvailablePositive4256489 - 425718724926.3

Displaying genes 3751 – 3760 of 5048 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.