Rubritalea profundi strain SAORIC-165

rod

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Rubritaleaceae

Genus

Rubritalea

Description

Rubritalea profundi strain SAORIC-165 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. The organism is documented under the accession number MQWA00000000.1, which provides a reference for its genetic information. The Gram-negative classification indicates that Rubritalea profundi strain SAORIC-165 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a typical feature of many bacteria in this category. This structural characteristic may influence its interaction with the environment, including its susceptibility to antibiotics and its role in various ecological niches. The rod shape of the bacterium can be indicative of its motility and growth patterns, as bacteria with this morphology often exhibit specific modes of movement and nutrient absorption. The single replicon suggests a streamlined genomic organization, which can be advantageous for efficient replication and adaptation in various environments. In an ecological context, the traits of Rubritalea profundi strain SAORIC-165 may influence its ecological roles, such as nutrient cycling or interactions with other microorganisms. As a member of its genus, it may contribute to the degradation of organic materials or the maintenance of microbial diversity in its habitat. Overall, understanding the specific traits of this strain can provide insights into its functional roles within microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyRubritaleaceae
GenusRubritalea
SpeciesRubritalea profundi
Strainstrain SAORIC-165

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubritalea profundi strain SAORIC-165 scaffold00004, whole genome

Gene Summary

Adenine Count

1013806 bp

Thymine Count

1011616 bp

Guanine Count

993274 bp

Cytosine Count

986557 bp

Genome Length

4167407 bp

Protein-coding Genes

3391 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna pseudouridine synthaseBSZ32_00625Not AvailablePositive144277 - 14520633974.8
hypothetical proteinBSZ32_00630Not AvailablePositive145298 - 14755685676.0
hypothetical proteinBSZ32_00635Not AvailableNegative147565 - 14793013331.0
malate dehydrogenaseBSZ32_00640Not AvailableNegative147930 - 14891334356.9
hypothetical proteinBSZ32_00645Not AvailableNegative149055 - 14932710170.1
hypothetical proteinBSZ32_00650Not AvailableNegative149358 - 14976815477.6
Trna-aspNot AvailableNot AvailablePositive149920 - 149996Not Available
Trna-aspNot AvailableNot AvailablePositive150029 - 150105Not Available
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadBSZ32_00665Not AvailablePositive150406 - 15146137372.1
hypothetical proteinBSZ32_00670Not AvailablePositive151547 - 15271042808.3

Displaying genes 121 – 130 of 3438 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.