Rubritalea profundi strain SAORIC-165

rod

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Rubritaleaceae

Genus

Rubritalea

Description

Rubritalea profundi strain SAORIC-165 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. The organism is documented under the accession number MQWA00000000.1, which provides a reference for its genetic information. The Gram-negative classification indicates that Rubritalea profundi strain SAORIC-165 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a typical feature of many bacteria in this category. This structural characteristic may influence its interaction with the environment, including its susceptibility to antibiotics and its role in various ecological niches. The rod shape of the bacterium can be indicative of its motility and growth patterns, as bacteria with this morphology often exhibit specific modes of movement and nutrient absorption. The single replicon suggests a streamlined genomic organization, which can be advantageous for efficient replication and adaptation in various environments. In an ecological context, the traits of Rubritalea profundi strain SAORIC-165 may influence its ecological roles, such as nutrient cycling or interactions with other microorganisms. As a member of its genus, it may contribute to the degradation of organic materials or the maintenance of microbial diversity in its habitat. Overall, understanding the specific traits of this strain can provide insights into its functional roles within microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyRubritaleaceae
GenusRubritalea
SpeciesRubritalea profundi
Strainstrain SAORIC-165

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubritalea profundi strain SAORIC-165 scaffold00004, whole genome

Gene Summary

Adenine Count

1013806 bp

Thymine Count

1011616 bp

Guanine Count

993274 bp

Cytosine Count

986557 bp

Genome Length

4167407 bp

Protein-coding Genes

3391 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBSZ32_05635Not AvailablePositive1296385 - 1299402111740.0
hypothetical proteinBSZ32_05640Not AvailablePositive1299420 - 130043336840.6
hypothetical proteinBSZ32_05645Not AvailablePositive1300632 - 130133925549.9
hypothetical proteinBSZ32_05650Not AvailablePositive1301380 - 130178415320.9
hypothetical proteinBSZ32_05655Not AvailablePositive1302063 - 13022727545.7
atp-dependent helicaseBSZ32_05660Not AvailableNegative1302349 - 130431373703.1
hit family hydrolaseBSZ32_05665Not AvailablePositive1304458 - 130478712355.7
bifunctional glutamate--cysteine ligase/glutathione synthetaseBSZ32_05670Not AvailablePositive1304865 - 130715986043.7
hypothetical proteinBSZ32_05675Not AvailablePositive1307294 - 130783018904.9
phosphoenolpyruvate carboxykinaseBSZ32_05680Not AvailablePositive1307997 - 130985069443.8

Displaying genes 1081 – 1090 of 3438 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.