Nonlabens agnitus strain JCM 17109

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens agnitus strain JCM 17109 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing two replicons, which may suggest a level of genetic complexity and adaptability in its genomic architecture. The genomic information associated with Nonlabens agnitus strain JCM 17109 is cataloged under the accessions MQUC00000000.1 and NZ_CM009580.1, providing a basis for further study and comparison within the genus Nonlabens. The presence of two replicons could indicate a potential for diverse metabolic capabilities or resilience in various environmental conditions, although specific metabolic pathways or ecological roles have not been detailed. This trait may enhance the organism's ability to thrive in different habitats, contributing to its ecological success. Nonlabens species are often found in aquatic environments, suggesting that strain JCM 17109 may play a role in nutrient cycling or interactions within microbial communities. Overall, the characteristics of Nonlabens agnitus strain JCM 17109 highlight its potential significance in microbiological research and environmental studies, particularly in understanding the dynamics of Gram-negative bacteria in aquatic ecosystems. Further investigation could elucidate its ecological functions and contributions to microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens agnitus
Strainstrain JCM 17109

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens agnitus strain JCM 17109 plasmid p2, whole genome

Gene Summary

Adenine Count

1565 bp

Thymine Count

1092 bp

Guanine Count

1562 bp

Cytosine Count

1431 bp

Genome Length

5650 bp

Protein-coding Genes

12 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-dehydrorhamnose 3,5-epimeraseBST86_07370Not AvailableNegative1628528 - 162910922298.2
glucose-1-phosphate thymidylyltransferaseBST86_07375Not AvailableNegative1629106 - 162996631346.6
dtdp-glucose 4,6-dehydrataseBST86_07380Not AvailableNegative1630120 - 163114238209.9
udp-glucose 6-dehydrogenaseBST86_07385Not AvailableNegative1631194 - 163258851463.5
cell envelope biogenesis protein ompaBST86_07390Not AvailablePositive1633086 - 163437547307.9
hypothetical proteinBST86_07395Not AvailableNegative1635088 - 163690269638.7
thiol:disulfide interchange proteinBST86_07400Not AvailableNegative1636909 - 163894875431.1
trna lysidine(34) synthetase tilsBST86_07405Not AvailableNegative1638945 - 164027650691.6
aminodeoxychorismate synthase, component iBST86_07410Not AvailableNegative1640286 - 164159949156.7
tonb-dependent receptorBST86_07415Not AvailableNegative1641704 - 164395383878.5

Displaying genes 1471 – 1480 of 2910 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.